| Career - Homeruns Allowed | |||
| Rk | Player Name | Totals | |
| 1 | Mike Mussina | 246 | |
| 2 | Tom Glavine | 156 | |
| 3 | Cristian Javier | 123 | |
| 4 | Barry Zito | 120 | |
| 5 | Bruce Hurst | 119 | |
| 6 | David Wells | 104 | |
| 7 | Scott Baker | 96 | |
| 8 | Domingo German | 92 | |
| 9 | Jeff Suppan | 91 | |
| 10 | John Burkett | 85 | |
| 11 | Livan Hernandez | 83 | |
| 12 | Dinelson Lamet | 82 | |
| 13 | Andy Pettitte | 78 | |
| 14 | Dwight Gooden | 77 | |
| 15 | Kenta Maeda | 77 | |
| 16 | Allen Watson | 76 | |
| 17 | Marcus Stroman | 76 | |
| 18 | Koji Uehara | 73 | |
| 19 | Tom Koehler | 70 | |
| 20 | Yonny Chirinos | 69 | |
| 21 | Mike Fiers | 63 | |
| 22 | Kirk Rueter | 62 | |
| 23 | Michael Fiers | 59 | |
| 24 | Bronson Arroyo | 58 | |
| 25 | Masahiro Tanaka | 58 | |
| Single Season - Homeruns Allowed | |||||
| Rk | Player Name | Totals | Year | ||
| 1 | Bruce Hurst | 53 | 1991 | ||
| 2 | Rick Reuschel | 51 | 1990 | ||
| 3 | John Lackey | 45 | 2018 | ||
| 4 | Allen Watson | 43 | 1998 | ||
| 5 | Cristian Javier | 43 | 2021 | ||
| 6 | Marcus Stroman | 42 | 2023 | ||
| 7 | Scott Baker | 41 | 2011 | ||
| 8 | Domingo German | 40 | 2024 | ||
| 9 | Mark Leiter | 38 | 1997 | ||
| 10 | Ariel Miranda | 38 | 2017 | ||
| 11 | Mike Fiers | 38 | 2021 | ||
| 12 | Bill Pulsipher | 37 | 2000 | ||
| 13 | Livan Hernandez | 37 | 1999 | ||
| 14 | David Wells | 37 | 2000 | ||
| 15 | Scott Baker | 37 | 2010 | ||
| 16 | James McDonald | 37 | 2013 | ||
| 17 | Tim Adleman | 37 | 2017 | ||
| 18 | Yonny Chirinos | 36 | 2020 | ||
| 19 | Cristian Javier | 36 | 2022 | ||
| 20 | Reynaldo Lopez | 36 | 2022 | ||
| 21 | Paul Byrd | 35 | 2003 | ||
| 22 | Matt Shoemaker | 35 | 2015 | ||
| 23 | Juan Guzman | 34 | 1994 | ||
| 24 | Cody Ponce | 34 | 2021 | ||
| 25 | Dwight Gooden | 33 | 1994 | ||